You are correct that the timeout is not showing in the GUI. The root user is getting emails from the cron process that look like this:
Subject: Cron <root@mlwnag22> LANG=C LC_ALL=C /usr/bin/mrtg /etc/mrtg/mrtg.cfg --lock-file /var/lock/mrtg/mrtg_l --confcache-file /var/lib/mrtg/mrtg.ok
SNMPGET Problem for ifHCInOctets.10620 ifHCOutOctets.10620 on
[email protected]:161::::2:v4only: No response from remote host "10.7.196.250" at /usr/bin/../lib/mrtg2/Net_SNMP_util.pm line 594.
Net_SNMP_util::snmpget('
[email protected]:161::::2:v4only', 'HASH(0x47892f0)', 'ifHCInOctets.10620', 'ifHCOutOctets.10620') called at /usr/bin/mrtg line 2330
main::getsnmparg('HASH(0x22432e0)', 'HASH(0x478c040)', 'HASH(0x2130678)', 'HASH(0x25e08d0)') called at /usr/bin/mrtg line 2510
main::readtargets('HASH(0x22432e0)', 'ARRAY(0x22cdd48)', 'HASH(0x2130678)') called at /usr/bin/mrtg line 403
main::main called at /usr/bin/mrtg line 143
2018-02-14 11:00:05: WARNING: skipping because at least the query for ifHCInOctets.10620 on 10.7.196.250 did not succeed
2018-02-14 11:00:05: WARNING: no data for ifHCInOctets&ifHCOutOctets:
[email protected]. Skipping further queries for Host 10.7.196.250 in this round.
2018-02-14 11:03:09: ERROR: Target[10.7.196.250_10620][_IN_] ' $target->[2370]{$mode} ' did not eval into defined data
2018-02-14 11:03:09: ERROR: Target[10.7.196.250_10620][_OUT_] ' $target->[2370]{$mode} ' did not eval into defined data
2018-02-14 11:03:09: ERROR: Target[10.7.196.250_10621][_IN_] ' $target->[2371]{$mode} ' did not eval into defined data
2018-02-14 11:03:09: ERROR: Target[10.7.196.250_10621][_OUT_] ' $target->[2371]{$mode} ' did not eval into defined data
... (there are more of these last 2 lines for the rest of the interfaces, they all look the same) ...
This error is not consistently for the same host, although there are a few that tend to be the ones that get them, and the hosts are actually up and functional, but the WAN connections to them are sometimes slow.