I'm not aware of any issues this might cause, but I can check with the developers to confirm. Just note that any changes you make to the code will be overwritten on an upgrade, and strictly-speaking cannot be guaranteed to work since we did not write the changes ourselves.
Got some updates from the devs. Looks like --single-transaciton will only work in InnoDB tables, where we use MyISAM. --quick also seems to be set to true by default, so those changes likely won't have any effect.